Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Shroom3Q9QXN0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Shroom3Q9QXN0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Shroom3Q9QXN0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.7■□□□□ 0.42
Shroom3Q9QXN0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Gm10138-203ENSMUST00000206952 366 ntBASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shroom3Q9QXN0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.68■□□□□ 0.42
Shroom3Q9QXN0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Gm6433-201ENSMUST00000118634 875 ntBASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Gm42545-201ENSMUST00000202755 922 ntBASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shroom3Q9QXN0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shroom3Q9QXN0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.65■□□□□ 0.42
Shroom3Q9QXN0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms