Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sec61a2Q9JLR1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
Sec61a2Q9JLR1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Rab3c-203ENSMUST00000224180 967 ntBASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sec61a2Q9JLR1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sec61a2Q9JLR1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sec61a2Q9JLR1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Gm12527-201ENSMUST00000117967 564 ntBASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sec61a2Q9JLR1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Gm10653-202ENSMUST00000139570 835 ntBASIC15.85■□□□□ 0.13
Sec61a2Q9JLR1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms