Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx5Q9JL61 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx5Q9JL61 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rfx5Q9JL61 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.64■□□□□ 0.57
Rfx5Q9JL61 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Gm21814-202ENSMUST00000203277 873 ntBASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx5Q9JL61 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rfx5Q9JL61 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rfx5Q9JL61 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rfx5Q9JL61 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms