Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tdp2Q9JJX7 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.39■□□□□ 0.38
Tdp2Q9JJX7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tdp2Q9JJX7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tdp2Q9JJX7 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Gm7290-201ENSMUST00000104990 617 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Gm12918-201ENSMUST00000120234 636 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Gm15710-201ENSMUST00000121821 636 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Gm5075-201ENSMUST00000196916 622 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tdp2Q9JJX7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Gm6365-201ENSMUST00000054711 744 ntBASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Tdp2Q9JJX7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tdp2Q9JJX7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms