Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Herpud1Q9JJK5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Herpud1Q9JJK5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Gm6211-202ENSMUST00000167849 925 ntBASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Gm42569-201ENSMUST00000200539 472 ntBASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herpud1Q9JJK5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm7290-201ENSMUST00000104990 617 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm12918-201ENSMUST00000120234 636 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm15710-201ENSMUST00000121821 636 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm5075-201ENSMUST00000196916 622 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Idnk-204ENSMUST00000226010 1898 ntBASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Herpud1Q9JJK5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herpud1Q9JJK5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms