Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Copb1Q9JIF7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Copb1Q9JIF7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Copb1Q9JIF7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Gm29791-202ENSMUST00000207888 369 ntBASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Copb1Q9JIF7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.29■□□□□ 0.68
Copb1Q9JIF7 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Gm44549-201ENSMUST00000208351 577 ntBASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Copb1Q9JIF7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Copb1Q9JIF7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Mir8112-201ENSMUST00000184382 131 ntBASIC19.27■□□□□ 0.68
Copb1Q9JIF7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms