Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.28□□□□□ -0.12
Rhox4bQ9JI43 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rhox4bQ9JI43 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rhox4bQ9JI43 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
Rhox4bQ9JI43 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Dancr-204ENSMUST00000132389 2347 ntBASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rhox4bQ9JI43 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rhox4bQ9JI43 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms