Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Gm12821-201ENSMUST00000120022 600 ntBASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ube4bQ9ES00 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4bQ9ES00 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.96■□□□□ 0.3
Ube4bQ9ES00 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.96■□□□□ 0.3
Ube4bQ9ES00 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ube4bQ9ES00 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ube4bQ9ES00 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Gm15039-201ENSMUST00000118914 875 ntBASIC16.94■□□□□ 0.3
Ube4bQ9ES00 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Ube4bQ9ES00 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Gm12251-201ENSMUST00000117893 792 ntBASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ube4bQ9ES00 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ube4bQ9ES00 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms