Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim54Q9ERP3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Gm6659-201ENSMUST00000174752 547 ntBASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim54Q9ERP3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Tgds-204ENSMUST00000228543 1594 ntBASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim54Q9ERP3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim54Q9ERP3 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim54Q9ERP3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.04■□□□□ 0.64
Trim54Q9ERP3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim54Q9ERP3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Gm13401-201ENSMUST00000117074 291 ntBASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Gm45058-201ENSMUST00000205810 766 ntBASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim54Q9ERP3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim54Q9ERP3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms