Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tubb3Q9ERD7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Tubb3Q9ERD7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tubb3Q9ERD7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tubb3Q9ERD7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tubb3Q9ERD7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Gm44549-201ENSMUST00000208351 577 ntBASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Gm10812-201ENSMUST00000099864 546 ntBASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tubb3Q9ERD7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tubb3Q9ERD7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tubb3Q9ERD7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tubb3Q9ERD7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.47■□□□□ 0.39
Tubb3Q9ERD7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms