Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Upf1Q9EPU0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Upf1Q9EPU0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Upf1Q9EPU0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Upf1Q9EPU0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Upf1Q9EPU0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Upf1Q9EPU0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Upf1Q9EPU0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Upf1Q9EPU0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Gm27321-201ENSMUST00000185021 205 ntBASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Upf1Q9EPU0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 AC125350.1-201ENSMUST00000225115 903 ntBASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Upf1Q9EPU0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Upf1Q9EPU0 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Upf1Q9EPU0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upf1Q9EPU0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Upf1Q9EPU0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upf1Q9EPU0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upf1Q9EPU0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Upf1Q9EPU0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Upf1Q9EPU0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms