Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.41■□□□□ 0.54
Chmp2aQ9DB34 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chmp2aQ9DB34 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp2aQ9DB34 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chmp2aQ9DB34 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.39■□□□□ 0.53
Chmp2aQ9DB34 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Gm10698-201ENSMUST00000182663 604 ntBASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Gm10812-201ENSMUST00000099864 546 ntBASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chmp2aQ9DB34 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gm42545-201ENSMUST00000202755 922 ntBASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Chmp2aQ9DB34 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chmp2aQ9DB34 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Mir2861-201ENSMUST00000175539 82 ntBASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Chmp2aQ9DB34 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Chmp2aQ9DB34 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms