Protein–RNA interactions for Protein: Q9DA21

Smco2, Single-pass membrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco2Q9DA21 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smco2Q9DA21 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smco2Q9DA21 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.86■□□□□ 0.77
Smco2Q9DA21 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.86■□□□□ 0.77
Smco2Q9DA21 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Smco2Q9DA21 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.85■□□□□ 0.77
Smco2Q9DA21 Gm5417-201ENSMUST00000079706 384 ntBASIC19.85■□□□□ 0.77
Smco2Q9DA21 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smco2Q9DA21 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.84■□□□□ 0.77
Smco2Q9DA21 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Gm13836-201ENSMUST00000121159 501 ntBASIC19.84■□□□□ 0.77
Smco2Q9DA21 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.84■□□□□ 0.77
Smco2Q9DA21 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.84■□□□□ 0.77
Smco2Q9DA21 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Smco2Q9DA21 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.84■□□□□ 0.77
Smco2Q9DA21 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.83■□□□□ 0.77
Smco2Q9DA21 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Smco2Q9DA21 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Gm12382-201ENSMUST00000122005 922 ntBASIC19.83■□□□□ 0.77
Smco2Q9DA21 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Gm21814-202ENSMUST00000203277 873 ntBASIC19.83■□□□□ 0.77
Smco2Q9DA21 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smco2Q9DA21 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Smco2Q9DA21 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smco2Q9DA21 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Smco2Q9DA21 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smco2Q9DA21 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms