Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Mbd3l1Q9D9H3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Mbd3l1Q9D9H3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Mbd3l1Q9D9H3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Mbd3l1Q9D9H3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Mbd3l1Q9D9H3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Mbd3l1Q9D9H3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Mbd3l1Q9D9H3 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms