Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cldnd2Q9D9H2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.23■□□□□ 0.03
Cldnd2Q9D9H2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cldnd2Q9D9H2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cldnd2Q9D9H2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd2Q9D9H2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.21■□□□□ 0.02
Cldnd2Q9D9H2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd2Q9D9H2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd2Q9D9H2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cldnd2Q9D9H2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.2■□□□□ 0.02
Cldnd2Q9D9H2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cldnd2Q9D9H2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms