Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp4cQ9D7F7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp4cQ9D7F7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Chmp4cQ9D7F7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Gm15635-204ENSMUST00000208024 2539 ntBASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp4cQ9D7F7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Chmp4cQ9D7F7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Chmp4cQ9D7F7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Chmp4cQ9D7F7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Gm37820-201ENSMUST00000194021 2147 ntBASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Gm37179-201ENSMUST00000194862 823 ntBASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4cQ9D7F7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms