Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.66■□□□□ 0.9
Ccdc7Q9D541 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccdc7Q9D541 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccdc7Q9D541 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc7Q9D541 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccdc7Q9D541 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ccdc7Q9D541 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Dio3-201ENSMUST00000097228 1449 ntBASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Mir6349-201ENSMUST00000184059 97 ntBASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ccdc7Q9D541 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Gm11643-201ENSMUST00000119578 864 ntBASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccdc7Q9D541 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ccdc7Q9D541 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ccdc7Q9D541 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ccdc7Q9D541 Gm10138-203ENSMUST00000206952 366 ntBASIC20.59■□□□□ 0.89
Ccdc7Q9D541 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms