Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cfap53Q9D439 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.35■□□□□ 0.69
Cfap53Q9D439 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Gm29257-201ENSMUST00000186115 639 ntBASIC19.34■□□□□ 0.69
Cfap53Q9D439 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cfap53Q9D439 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap53Q9D439 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Cfap53Q9D439 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cfap53Q9D439 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.33■□□□□ 0.69
Cfap53Q9D439 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.33■□□□□ 0.69
Cfap53Q9D439 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.33■□□□□ 0.68
Cfap53Q9D439 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.33■□□□□ 0.68
Cfap53Q9D439 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cfap53Q9D439 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Gm20049-201ENSMUST00000219950 730 ntBASIC19.32■□□□□ 0.68
Cfap53Q9D439 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cfap53Q9D439 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Gm10418-201ENSMUST00000100943 576 ntBASIC19.31■□□□□ 0.68
Cfap53Q9D439 Mtag2-201ENSMUST00000058665 714 ntBASIC19.31■□□□□ 0.68
Cfap53Q9D439 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cfap53Q9D439 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Gm10138-203ENSMUST00000206952 366 ntBASIC19.3■□□□□ 0.68
Cfap53Q9D439 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cfap53Q9D439 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.29■□□□□ 0.68
Cfap53Q9D439 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Gm11249-201ENSMUST00000117071 859 ntBASIC19.29■□□□□ 0.68
Cfap53Q9D439 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Gm27275-201ENSMUST00000184318 272 ntBASIC19.29■□□□□ 0.68
Cfap53Q9D439 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cfap53Q9D439 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms