Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Stag1Q9D3E6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Stag1Q9D3E6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Stag1Q9D3E6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Stag1Q9D3E6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Fst-202ENSMUST00000223640 2612 ntBASIC21■□□□□ 0.95
Stag1Q9D3E6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21■□□□□ 0.95
Stag1Q9D3E6 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Gm4217-201ENSMUST00000182243 1002 ntBASIC21■□□□□ 0.95
Stag1Q9D3E6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21■□□□□ 0.95
Stag1Q9D3E6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21■□□□□ 0.95
Stag1Q9D3E6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21■□□□□ 0.95
Stag1Q9D3E6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Stag1Q9D3E6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Gm10013-201ENSMUST00000106074 672 ntBASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Gm7638-201ENSMUST00000121348 967 ntBASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Stag1Q9D3E6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Gm23634-201ENSMUST00000175071 91 ntBASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Stag1Q9D3E6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Gm21362-201ENSMUST00000194272 928 ntBASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Stag1Q9D3E6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Stag1Q9D3E6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms