Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mms19Q9D071 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mms19Q9D071 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mms19Q9D071 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Mms19Q9D071 Gm6576-201ENSMUST00000169678 883 ntBASIC18.84■□□□□ 0.61
Mms19Q9D071 Gm42545-201ENSMUST00000202755 922 ntBASIC18.84■□□□□ 0.61
Mms19Q9D071 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.84■□□□□ 0.61
Mms19Q9D071 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.84■□□□□ 0.61
Mms19Q9D071 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.84■□□□□ 0.61
Mms19Q9D071 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mms19Q9D071 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mms19Q9D071 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mms19Q9D071 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mms19Q9D071 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mms19Q9D071 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mms19Q9D071 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.83■□□□□ 0.6
Mms19Q9D071 Mir1199-201ENSMUST00000117015 119 ntBASIC18.83■□□□□ 0.6
Mms19Q9D071 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Mir2861-201ENSMUST00000175539 82 ntBASIC18.83■□□□□ 0.6
Mms19Q9D071 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.83■□□□□ 0.6
Mms19Q9D071 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mms19Q9D071 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.83■□□□□ 0.6
Mms19Q9D071 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mms19Q9D071 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mms19Q9D071 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mms19Q9D071 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Mms19Q9D071 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Mms19Q9D071 Gm43183-201ENSMUST00000200632 547 ntBASIC18.82■□□□□ 0.6
Mms19Q9D071 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Mms19Q9D071 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mms19Q9D071 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.81■□□□□ 0.6
Mms19Q9D071 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mms19Q9D071 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.81■□□□□ 0.6
Mms19Q9D071 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mms19Q9D071 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Mir7071-201ENSMUST00000184847 69 ntBASIC18.8■□□□□ 0.6
Mms19Q9D071 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.8■□□□□ 0.6
Mms19Q9D071 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.8■□□□□ 0.6
Mms19Q9D071 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mms19Q9D071 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mms19Q9D071 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Mms19Q9D071 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mms19Q9D071 Gm37292-201ENSMUST00000192062 758 ntBASIC18.79■□□□□ 0.6
Mms19Q9D071 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Mms19Q9D071 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Mms19Q9D071 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms