Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hcfc1r1Q9CYQ5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gm43060-201ENSMUST00000200621 289 ntBASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gm45417-201ENSMUST00000209533 758 ntBASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hcfc1r1Q9CYQ5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Hcfc1r1Q9CYQ5 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Hcfc1r1Q9CYQ5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Hcfc1r1Q9CYQ5 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hcfc1r1Q9CYQ5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms