Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ssu72Q9CY97 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ssu72Q9CY97 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ssu72Q9CY97 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Gm10418-201ENSMUST00000100943 576 ntBASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ssu72Q9CY97 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Gm6420-201ENSMUST00000193885 723 ntBASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ssu72Q9CY97 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ssu72Q9CY97 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.52■□□□□ 0.39
Ssu72Q9CY97 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ssu72Q9CY97 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.52■□□□□ 0.39
Ssu72Q9CY97 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms