Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssr1Q9CY50 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Gm22325-201ENSMUST00000158904 308 ntBASIC19.11■□□□□ 0.65
Ssr1Q9CY50 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ssr1Q9CY50 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ssr1Q9CY50 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssr1Q9CY50 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssr1Q9CY50 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ssr1Q9CY50 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Gm42569-201ENSMUST00000200539 472 ntBASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Ssr1Q9CY50 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Gm6365-201ENSMUST00000054711 744 ntBASIC19.06■□□□□ 0.64
Ssr1Q9CY50 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssr1Q9CY50 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms