Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf135Q9CWS1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf135Q9CWS1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf135Q9CWS1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Rnf135Q9CWS1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf135Q9CWS1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Gm10812-201ENSMUST00000099864 546 ntBASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf135Q9CWS1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 Gm37856-201ENSMUST00000191634 999 ntBASIC18.31■□□□□ 0.52
Rnf135Q9CWS1 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms