Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Gm10849-201ENSMUST00000100397 618 ntBASIC20.75■□□□□ 0.91
Smc3Q9CW03 Gm6211-202ENSMUST00000167849 925 ntBASIC20.75■□□□□ 0.91
Smc3Q9CW03 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.75■□□□□ 0.91
Smc3Q9CW03 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc3Q9CW03 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm7290-201ENSMUST00000104990 617 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm12918-201ENSMUST00000120234 636 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm15710-201ENSMUST00000121821 636 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm18284-201ENSMUST00000172604 624 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm5075-201ENSMUST00000196916 622 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.74■□□□□ 0.91
Smc3Q9CW03 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smc3Q9CW03 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc3Q9CW03 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Gm38285-201ENSMUST00000192928 922 ntBASIC20.72■□□□□ 0.91
Smc3Q9CW03 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc3Q9CW03 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.72■□□□□ 0.91
Smc3Q9CW03 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.71■□□□□ 0.91
Smc3Q9CW03 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Gm2399-201ENSMUST00000104944 225 ntBASIC20.71■□□□□ 0.91
Smc3Q9CW03 Gm42569-201ENSMUST00000200539 472 ntBASIC20.71■□□□□ 0.91
Smc3Q9CW03 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc3Q9CW03 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.7■□□□□ 0.9
Smc3Q9CW03 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc3Q9CW03 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smc3Q9CW03 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms