Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retreg3Q9CQV4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retreg3Q9CQV4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retreg3Q9CQV4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retreg3Q9CQV4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
Retreg3Q9CQV4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retreg3Q9CQV4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Gm43183-201ENSMUST00000200632 547 ntBASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retreg3Q9CQV4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retreg3Q9CQV4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retreg3Q9CQV4 Gm11643-201ENSMUST00000119578 864 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms