Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lsm7Q9CQQ8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm7Q9CQQ8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm7Q9CQQ8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Gm3375-201ENSMUST00000203929 796 ntBASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Gm4974-201ENSMUST00000209974 875 ntBASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm7Q9CQQ8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm7Q9CQQ8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm7Q9CQQ8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Lsm7Q9CQQ8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.83■□□□□ 0.45
Lsm7Q9CQQ8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm7Q9CQQ8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
Lsm7Q9CQQ8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Iqck-206ENSMUST00000208658 2891 ntBASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gm12085-201ENSMUST00000119263 940 ntBASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.81■□□□□ 0.44
Lsm7Q9CQQ8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Gm43799-201ENSMUST00000201845 579 ntBASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lsm7Q9CQQ8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm7Q9CQQ8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms