Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rpa3Q9CQ71 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.65■□□□□ 0.58
Rpa3Q9CQ71 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rpa3Q9CQ71 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rpa3Q9CQ71 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Gm29791-202ENSMUST00000207888 369 ntBASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Rpa3Q9CQ71 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rpa3Q9CQ71 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Gm5643-201ENSMUST00000117081 966 ntBASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rpa3Q9CQ71 Idnk-204ENSMUST00000226010 1898 ntBASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.6■□□□□ 0.57
Rpa3Q9CQ71 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Rpa3Q9CQ71 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms