Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim34aQ99PP6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Gm14859-201ENSMUST00000117752 357 ntBASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim34aQ99PP6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trim34aQ99PP6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Trim34aQ99PP6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.77■■□□□ 1.07
Trim34aQ99PP6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Trim34aQ99PP6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trim34aQ99PP6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Gm37025-201ENSMUST00000195159 829 ntBASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Gm7370-201ENSMUST00000219471 767 ntBASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim34aQ99PP6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Gm27389-201ENSMUST00000183622 195 ntBASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Gm9731-201ENSMUST00000209480 747 ntBASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim34aQ99PP6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim34aQ99PP6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Gm21559-201ENSMUST00000220638 855 ntBASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Gm8587-201ENSMUST00000076538 843 ntBASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim34aQ99PP6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Il3ra-202ENSMUST00000223589 738 ntBASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim34aQ99PP6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms