Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Gm27704-201ENSMUST00000185094 107 ntBASIC20.77■□□□□ 0.92
Hdac9Q99N13 Gm9731-201ENSMUST00000209480 747 ntBASIC20.77■□□□□ 0.92
Hdac9Q99N13 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hdac9Q99N13 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac9Q99N13 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hdac9Q99N13 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac9Q99N13 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.76■□□□□ 0.91
Hdac9Q99N13 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac9Q99N13 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac9Q99N13 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.76■□□□□ 0.91
Hdac9Q99N13 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac9Q99N13 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hdac9Q99N13 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Hdac9Q99N13 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.75■□□□□ 0.91
Hdac9Q99N13 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Hdac9Q99N13 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hdac9Q99N13 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.74■□□□□ 0.91
Hdac9Q99N13 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Gm7213-201ENSMUST00000215977 950 ntBASIC20.74■□□□□ 0.91
Hdac9Q99N13 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Il3ra-202ENSMUST00000223589 738 ntBASIC20.74■□□□□ 0.91
Hdac9Q99N13 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hdac9Q99N13 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hdac9Q99N13 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac9Q99N13 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac9Q99N13 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Hdac9Q99N13 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac9Q99N13 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac9Q99N13 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hdac9Q99N13 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Gm29518-201ENSMUST00000190858 372 ntBASIC20.71■□□□□ 0.91
Hdac9Q99N13 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.71■□□□□ 0.91
Hdac9Q99N13 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.71■□□□□ 0.91
Hdac9Q99N13 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hdac9Q99N13 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac9Q99N13 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hdac9Q99N13 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac9Q99N13 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms