Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scrt1Q99M85 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.46■□□□□ 0.06
Scrt1Q99M85 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scrt1Q99M85 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scrt1Q99M85 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scrt1Q99M85 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.46■□□□□ 0.06
Scrt1Q99M85 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.45■□□□□ 0.06
Scrt1Q99M85 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.45■□□□□ 0.06
Scrt1Q99M85 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scrt1Q99M85 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Scrt1Q99M85 AA414768-201ENSMUST00000121924 1257 ntBASIC15.44■□□□□ 0.06
Scrt1Q99M85 Gm12382-201ENSMUST00000122005 922 ntBASIC15.44■□□□□ 0.06
Scrt1Q99M85 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Gm33142-201ENSMUST00000193913 867 ntBASIC15.44■□□□□ 0.06
Scrt1Q99M85 Gm18959-201ENSMUST00000208954 655 ntBASIC15.44■□□□□ 0.06
Scrt1Q99M85 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scrt1Q99M85 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.43■□□□□ 0.06
Scrt1Q99M85 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.43■□□□□ 0.06
Scrt1Q99M85 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scrt1Q99M85 Fst-202ENSMUST00000223640 2612 ntBASIC15.42■□□□□ 0.06
Scrt1Q99M85 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Ank2-226ENSMUST00000189368 339 ntBASIC15.42■□□□□ 0.06
Scrt1Q99M85 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scrt1Q99M85 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.42■□□□□ 0.06
Scrt1Q99M85 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scrt1Q99M85 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.41■□□□□ 0.06
Scrt1Q99M85 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Scrt1Q99M85 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Gm9103-201ENSMUST00000119371 405 ntBASIC15.4■□□□□ 0.06
Scrt1Q99M85 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Gm18032-201ENSMUST00000222541 538 ntBASIC15.4■□□□□ 0.06
Scrt1Q99M85 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scrt1Q99M85 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms