Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clp1Q99LI9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clp1Q99LI9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clp1Q99LI9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Gm11950-201ENSMUST00000121615 838 ntBASIC18.63■□□□□ 0.57
Clp1Q99LI9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clp1Q99LI9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Gm18958-201ENSMUST00000174258 762 ntBASIC18.62■□□□□ 0.57
Clp1Q99LI9 Gm27357-201ENSMUST00000183754 135 ntBASIC18.62■□□□□ 0.57
Clp1Q99LI9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Gm7461-201ENSMUST00000058918 827 ntBASIC18.62■□□□□ 0.57
Clp1Q99LI9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clp1Q99LI9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Clp1Q99LI9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Gm26039-201ENSMUST00000158152 144 ntBASIC18.6■□□□□ 0.57
Clp1Q99LI9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Clp1Q99LI9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clp1Q99LI9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.59■□□□□ 0.57
Clp1Q99LI9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clp1Q99LI9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clp1Q99LI9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clp1Q99LI9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clp1Q99LI9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Clp1Q99LI9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clp1Q99LI9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clp1Q99LI9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clp1Q99LI9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clp1Q99LI9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms