Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Gm37055-201ENSMUST00000191866 133 ntBASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdha11Q91Y19 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Gm10517-202ENSMUST00000192970 758 ntBASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdha11Q91Y19 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Gm13401-201ENSMUST00000117074 291 ntBASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdha11Q91Y19 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdha11Q91Y19 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha11Q91Y19 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha11Q91Y19 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdha11Q91Y19 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdha11Q91Y19 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Timm23-208ENSMUST00000226683 750 ntBASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdha11Q91Y19 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms