Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb2Q91Y00 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Gm11643-201ENSMUST00000119578 864 ntBASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb2Q91Y00 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb2Q91Y00 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb2Q91Y00 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Gm10252-201ENSMUST00000209541 832 ntBASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb2Q91Y00 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.71■□□□□ 0.58
Pcdhb2Q91Y00 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb2Q91Y00 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Pcdhb2Q91Y00 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb2Q91Y00 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdhb2Q91Y00 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb2Q91Y00 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Gm29791-202ENSMUST00000207888 369 ntBASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb2Q91Y00 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms