Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb5Q91XZ5 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb5Q91XZ5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb5Q91XZ5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb5Q91XZ5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Pcdhb5Q91XZ5 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb5Q91XZ5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Gm13474-201ENSMUST00000122466 815 ntBASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb5Q91XZ5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.8■□□□□ 0.92
Pcdhb5Q91XZ5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb5Q91XZ5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Gm33142-201ENSMUST00000193913 867 ntBASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.78■□□□□ 0.92
Pcdhb5Q91XZ5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Golph3-205ENSMUST00000228671 2842 ntBASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb5Q91XZ5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb5Q91XZ5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Pcdhb5Q91XZ5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Pcdhb5Q91XZ5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Pcdhb5Q91XZ5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms