Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb6Q91XZ4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb6Q91XZ4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb6Q91XZ4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb6Q91XZ4 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb6Q91XZ4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Gm18666-201ENSMUST00000190039 958 ntBASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb6Q91XZ4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Gm6576-201ENSMUST00000169678 883 ntBASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb6Q91XZ4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.1■□□□□ 0.49
Pcdhb6Q91XZ4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms