Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhga3Q91XY5 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Gm5408-201ENSMUST00000197998 747 ntBASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Gm44549-201ENSMUST00000208351 577 ntBASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhga3Q91XY5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga3Q91XY5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.71■□□□□ 0.1
Pcdhga3Q91XY5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhga3Q91XY5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhga3Q91XY5 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhga3Q91XY5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Gm2399-201ENSMUST00000104944 225 ntBASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga3Q91XY5 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga3Q91XY5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Pcdhga3Q91XY5 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms