Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Gm27463-201ENSMUST00000183569 57 ntBASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhga6Q91XY2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhga6Q91XY2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.51■□□□□ 0.39
Pcdhga6Q91XY2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhga6Q91XY2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gm25016-201ENSMUST00000158399 131 ntBASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhga6Q91XY2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhga6Q91XY2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhga6Q91XY2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms