Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgb1Q91XX8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Gm9987-201ENSMUST00000069768 567 ntBASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhgb1Q91XX8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgb1Q91XX8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Gm30025-201ENSMUST00000218555 728 ntBASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Pcdhgb1Q91XX8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Timm23-208ENSMUST00000226683 750 ntBASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgb1Q91XX8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Gm12085-201ENSMUST00000119263 940 ntBASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Gm10517-202ENSMUST00000192970 758 ntBASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhgb1Q91XX8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhgb1Q91XX8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhgb1Q91XX8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms