Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Mir5122-201ENSMUST00000175004 89 ntBASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Gm18025-201ENSMUST00000221733 862 ntBASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.19■□□□□ 0.82
Ddx41Q91VN6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx41Q91VN6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx41Q91VN6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Gm42545-201ENSMUST00000202755 922 ntBASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx41Q91VN6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx41Q91VN6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Gm13836-201ENSMUST00000121159 501 ntBASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.15■□□□□ 0.82
Ddx41Q91VN6 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx41Q91VN6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms