Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb17Q91VD8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb17Q91VD8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb17Q91VD8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.27■□□□□ 0.51
Pcdhb17Q91VD8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb17Q91VD8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb17Q91VD8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 AC154849.3-201ENSMUST00000223733 1660 ntBASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb17Q91VD8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb17Q91VD8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm14913-201ENSMUST00000120011 1093 ntBASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb17Q91VD8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms