Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.21■□□□□ 0.03
Tram1Q91V04 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Gm38205-201ENSMUST00000192243 258 ntBASIC15.21■□□□□ 0.03
Tram1Q91V04 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tram1Q91V04 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tram1Q91V04 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tram1Q91V04 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tram1Q91V04 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.2■□□□□ 0.02
Tram1Q91V04 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.2■□□□□ 0.02
Tram1Q91V04 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tram1Q91V04 Idnk-204ENSMUST00000226010 1898 ntBASIC15.2■□□□□ 0.02
Tram1Q91V04 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tram1Q91V04 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Gm22325-201ENSMUST00000158904 308 ntBASIC15.19■□□□□ 0.02
Tram1Q91V04 Rps24-207ENSMUST00000224568 714 ntBASIC15.19■□□□□ 0.02
Tram1Q91V04 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tram1Q91V04 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Tram1Q91V04 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tram1Q91V04 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Tram1Q91V04 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Tram1Q91V04 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.18■□□□□ 0.02
Tram1Q91V04 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tram1Q91V04 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tram1Q91V04 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tram1Q91V04 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Gm14117-201ENSMUST00000122417 843 ntBASIC15.17■□□□□ 0.02
Tram1Q91V04 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.17■□□□□ 0.02
Tram1Q91V04 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tram1Q91V04 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tram1Q91V04 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tram1Q91V04 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.17■□□□□ 0.02
Tram1Q91V04 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Tram1Q91V04 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tram1Q91V04 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms