Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Gm10698-201ENSMUST00000182663 604 ntBASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb11Q91UZ8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Gm8520-201ENSMUST00000186517 868 ntBASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Gm29791-202ENSMUST00000207888 369 ntBASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb11Q91UZ8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb11Q91UZ8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Gm11643-201ENSMUST00000119578 864 ntBASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb11Q91UZ8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb11Q91UZ8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm37292-201ENSMUST00000192062 758 ntBASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdhb11Q91UZ8 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms