Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Gm16061-201ENSMUST00000122167 857 ntBASIC18.77■□□□□ 0.6
TraipQ8VIG6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Mir8112-201ENSMUST00000184382 131 ntBASIC18.77■□□□□ 0.6
TraipQ8VIG6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TraipQ8VIG6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TraipQ8VIG6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Gm13474-201ENSMUST00000122466 815 ntBASIC18.76■□□□□ 0.59
TraipQ8VIG6 Gm9731-201ENSMUST00000209480 747 ntBASIC18.76■□□□□ 0.59
TraipQ8VIG6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TraipQ8VIG6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.75■□□□□ 0.59
TraipQ8VIG6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.75■□□□□ 0.59
TraipQ8VIG6 Gm7791-201ENSMUST00000219066 539 ntBASIC18.75■□□□□ 0.59
TraipQ8VIG6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TraipQ8VIG6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Mir5130-201ENSMUST00000175160 84 ntBASIC18.74■□□□□ 0.59
TraipQ8VIG6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TraipQ8VIG6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.73■□□□□ 0.59
TraipQ8VIG6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm10013-201ENSMUST00000106074 672 ntBASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm17661-201ENSMUST00000170317 270 ntBASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
TraipQ8VIG6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TraipQ8VIG6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms