Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Lsm1Q8VC85 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Flg-201ENSMUST00000050758 1488 ntBASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lsm1Q8VC85 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Mir8112-201ENSMUST00000184382 131 ntBASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm1Q8VC85 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lsm1Q8VC85 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Rab3c-203ENSMUST00000224180 967 ntBASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm1Q8VC85 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Mir5133-201ENSMUST00000174955 77 ntBASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Gm27405-201ENSMUST00000184201 112 ntBASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm1Q8VC85 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Gm10418-201ENSMUST00000100943 576 ntBASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Mir2861-201ENSMUST00000175539 82 ntBASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm1Q8VC85 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm1Q8VC85 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms