Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Gm9988-201ENSMUST00000069786 435 ntBASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Reep4-203ENSMUST00000226563 1444 ntBASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nup35Q8R4R6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nup35Q8R4R6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Nup35Q8R4R6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nup35Q8R4R6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup35Q8R4R6 Haglr-201ENSMUST00000100000 2085 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms