Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Gm10418-201ENSMUST00000100943 576 ntBASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chrna3Q8R4G9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chrna3Q8R4G9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chrna3Q8R4G9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chrna3Q8R4G9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Gm37055-201ENSMUST00000191866 133 ntBASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chrna3Q8R4G9 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms