Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pspc1Q8R326 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Gm38027-201ENSMUST00000192315 235 ntBASIC20.29■□□□□ 0.84
Pspc1Q8R326 Gm4974-201ENSMUST00000209974 875 ntBASIC20.29■□□□□ 0.84
Pspc1Q8R326 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.29■□□□□ 0.84
Pspc1Q8R326 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pspc1Q8R326 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pspc1Q8R326 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Pspc1Q8R326 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.28■□□□□ 0.84
Pspc1Q8R326 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.28■□□□□ 0.84
Pspc1Q8R326 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Gm27463-201ENSMUST00000183569 57 ntBASIC20.27■□□□□ 0.84
Pspc1Q8R326 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pspc1Q8R326 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.27■□□□□ 0.84
Pspc1Q8R326 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pspc1Q8R326 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.27■□□□□ 0.83
Pspc1Q8R326 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.26■□□□□ 0.83
Pspc1Q8R326 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.26■□□□□ 0.83
Pspc1Q8R326 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Gm10418-201ENSMUST00000100943 576 ntBASIC20.26■□□□□ 0.83
Pspc1Q8R326 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pspc1Q8R326 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.26■□□□□ 0.83
Pspc1Q8R326 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pspc1Q8R326 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pspc1Q8R326 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms