Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Timm23-208ENSMUST00000226683 750 ntBASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rpp40Q8R1F9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Gm5417-201ENSMUST00000079706 384 ntBASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Rpp40Q8R1F9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rpp40Q8R1F9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Rpp40Q8R1F9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Rpp40Q8R1F9 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rpp40Q8R1F9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Gm12085-201ENSMUST00000119263 940 ntBASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rpp40Q8R1F9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Gm3375-201ENSMUST00000203929 796 ntBASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Odf3b-204ENSMUST00000227834 930 ntBASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rpp40Q8R1F9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rpp40Q8R1F9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Mir8112-201ENSMUST00000184382 131 ntBASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rpp40Q8R1F9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp40Q8R1F9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp40Q8R1F9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp40Q8R1F9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp40Q8R1F9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rpp40Q8R1F9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms