Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gm15794-201ENSMUST00000120182 631 ntBASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gm10052-201ENSMUST00000168019 960 ntBASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gm7729-201ENSMUST00000050143 801 ntBASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ddx54Q8K4L0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Gm18195-201ENSMUST00000207604 706 ntBASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC23.12■■□□□ 1.29
Ddx54Q8K4L0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx54Q8K4L0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Gm10418-201ENSMUST00000100943 576 ntBASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx54Q8K4L0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx54Q8K4L0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx54Q8K4L0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx54Q8K4L0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx54Q8K4L0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx54Q8K4L0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx54Q8K4L0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms